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1.
Ping Xie
“On chemomechanical coupling of the F1-ATPase molecular motor”
BBA 1787 (2009) 955
2. Ping Xie
“Dynamics of backtracking long pauses of RNA polymerase”
BBA 1789 (2009) 212
3. Bing-Yi Pan, Lingyun Zhang, Shuo-Xing Dou and Peng-Ye Wang
“Forces-induced pinpoint denaturation of short DNA”
BBRC 388 (2009) 137
4. Ping Xie
“A thermal ratchet model of tRNA–mRNA translocation by the ribosome”
BS 96 (2009) 19
5. Ping Xie
“A possible mechanism of processive nucleotide and repeat additions by the telomerase”
BS 97 (2009) 168
6. Jun Qian, Ping Xie, Xiao-Guang Xue and Peng-Ye Wang
“Modelling of a DNA packaging motor”
CPB 18 (2009) 4852
7. Ping Xie
“Molecular motors that digest their track to rectify Brownian motion: processive movement of exonuclease enzymes”
JPCM 21 (2009) 375108
8. Xing-Hua Zhang, Xi-Miao Hou, Chao Ji, Ming Li, Shuo-Xing Dou and Peng-Ye Wang
“Spermidine-induced two-dimensional DNA condensations on mica surfaces: A different pathway from condensations in solution”
CSB 54 (2009) 2425
9. Ping Xie
“A possible mechanism for the dynamics of transition between polymerase and exonuclease sites in a high-fidelity DNA polymerase”
JTB 259 (2009) 434
10. Lingyun Zhang and Peng-Ye Wang
“Effect of electron correlation and solvent on the conformational transition of DNA”
MPLB 23 (2009) 1861
11. Xi-Miao Hou, Xing-Hua Zhang, Kong-Ji Wei, Chao Ji, Shuo-Xing Dou, Wei-Chi Wang, Ming Li and Peng-Ye Wang
“Cisplatin induces loop structures and condensation of single DNA molecules”
NAR 37 (2009) 1400
12. Yi Wang, Yongjian Huang, Jiawei Wang, Chao Cheng, Weijiao Huang, Peilong Lu, Ya-Nan Xu, Peng-Ye Wang, Nieng Yan and Yigong Shi
“Structure of the formate transporter FocA reveals a pentameric aquaporin-like channel”
Nature 462 (2009) 467
13. Cong-Xin Li, Xiao-Fang Chen, Peng-Ye Wang and Wei-Chi Wang
“Circadian KaiC Phosphorylation: A Multi-Layer Network”
PCB 5 (2009) 1000568
14. Ping Xie
“Processive hand-over-hand motion of homodimeric nanomotors induced by interaction between two monomeric components and thermal noise”
PRE 79 (2009) 011920
15. Xi-Miao Hou, Wei Li, Shuo-Xing Dou, Ling-Yun Zhang, Ping Xie, Wei-Chi Wang and Peng-Ye Wang
“Formation of DNA toroids inside confined droplets adsorbed on mica surfaces”
PRE 79 (2009) 051912
16. Lingyun Zhang, Peng-Ye Wang and An-Chang Shi
“Spherical/gyroid phase diagram of the diblock copolymer in the median selective solvent”
SCSG 52 (2009) 518
17. Ping Xie
“A polymerase-site-jumping model for strand transfer during DNA synthesis by reverse transcriptase”
VR 144 (2009) 65
18. Ping Xie
“A model for processive movement of single-headed myosin-IX”
BC 151 (2010) 71
19. Ping Xie
“A modified model for translocation events of processive nucleotide and repeat additions by the recombinant telomerase”
BC 153 (2010) 83
20. Ye Yang, Shuo-Xing Dou, Ya-Nan Xu, Nicolas Bazeille, Peng-Ye Wang, Pascal Rigolet, Hou-Qiang Xu and Xu Guang Xi
“Kinetic Mechanism of DNA Unwinding by the BLM Helicase Core and Molecular Basis for Its Low Processivity”
Biochemistry 49 (2010) 656
21. Zhao-Wen Duan, Wei Li, Ping Xie, Shuo-Xing Dou and Peng-Ye Wang
“Brownian dynamics simulation of the cross-talking effect among modified histones on conformations of nucleosomes”
CPB 19 (2010) 048701
22. Bing-Yi Pan, Ling-Yun Zhang, Shuo-Xing Dou and Peng-Ye Wang
“Effect of Laser Field and Mechanical Force on Deoxyribonucleic Acid Melting”
CPL 27 (2010) 078701
23. Xiao-Fang Chen, Cong-Xin Li, Peng-Ye Wang and Wei-Chi Wang
“Cytoplasmic Ca2+ Dynamics under the Interplay between the Different IP3R Gating Models and the Plasma Membrane Ca2+ Influx”
CPL 27 (2010) 010504
24. Cong-Xin Li, Xiao-Fang Chen, Peng-Ye Wang and Wei-Chi Wang
“Effects of CRAC Channel on Spatiotemporal Ca2+ Patterns in T Cells”
CPL 27 (2010) 028701
25. Zhi-Qiang Sun, Ping Xie, Wei Li and Peng-Ye Wang
“Spiking Regularity and Coherence in Complex Hodgkin–Huxley Neuron Networks”
CPL 27 (2010) 088702
26. Ping Xie
“Dynamics of strand passage catalyzed by topoisomerase II”
EBJ 39 (2010) 1251
27. Ping Xie
“Mechanism of Processive Movement of Monomeric and Dimeric Kinesin Molecules”
IJBS 6 (2010) 665
28. Bing-Yi Pan, Shuo-Xing Dou, Ye Yang, Ya-Nan Xu, Elisabeth Bugnard, Xiu-Yan Ding, Lingyun Zhang, Peng-Ye Wang, Ming Li and Xu Guang Xi
“Mutual Inhibition of RecQ Molecules in DNA Unwinding”
JBC 285 (2010) 15884
29. Shuo-Xing Dou and Xu Guang Xi
“Fluorometric assays for characterizing DNA helicases”
Methods 51 (2010) 295
30. 侯锡苗, 张兴华, 魏孔吉, 季超, 窦硕星, 王渭池, 李明, 王鹏业
“用单分子技术研究抗癌药物顺铂对DNA结构的影响”
物理39 (2010) 108
31. 潘秉毅, 张凌云, 窦硕星, 王鹏业
“打开DNA双链的物理新方法——激光微流法”
物理39 (2010) 423
32. Jun Huang, Hui Li, Wei Chen, Guo-Hua Lv, Xing-Quan Wang, Guo-Ping Zhang, Kostya Ostrikov, Peng-Ye Wang and Si-Ze Yang
“Dielectric barrier discharge plasma in Ar/O2 promoting apoptosis behavior in A549 cancer cells”
APL 99 (2011) 253701
33. Chao Ji, Lingyun Zhang, Xi-Miao Hou, Shuo-Xing Dou and Peng-Ye Wang
“Effect of Cisplatin on the Flexibility of Linear DNA”
CPL 28 (2011) 068702
34. Chao Ji, Lingyun Zhang, Shuo-Xing Dou and Peng-Ye Wang
“A new method to deal with biomacromolecular image observed by atomic force microscopy”
APS 60 (2011) 098703
35. Yu-Ying Liu, Peng-Ye Wang, Shuo-Xing Dou, Wei-Wei Zhang, Xue-Jin Wang and Hong-Yi Sang
“Monitoring the binding of metal cations and histones to DNA in real time using fluorescence assays”
CSB 56 (2011) 1080
36. Yu-Ying Liu, Peng-Ye Wang, Shuo-Xing Dou, Wei-Wei Zhang, Xue-Jin Wang and Hong-Yi Sang
“Study of the interaction of DNA and histones by spin-stretching and droplet evaporation”
CSB 56 (2011) 1234
37. Ping Xie
“A model for dynamics of primer extension by eukaryotic DNA primase”
EBJ 40 (2011) 1157
38. Lingyun Zhang and Peng-Ye Wang
“Selectivity and temperature dependence of phase and phase transition in diblock copolymer solution”
EPJE 34 (2011) 43
39. Jun Huang, Wei Chen, Hui Li, Xing-Quan Wang, Guo-Hua Lv, M. Latif Khosa, Ming Guo, Ke-Cheng Feng, Peng-Ye Wang and Si-Ze Yang
“Deactivation of A549 cancer cells in vitro by a dielectric barrier discharge plasma needle”
JAP 109 (2011) 053305
40. Ping Xie
“A model for the dynamics of mammalian family X DNA polymerases”
JTB 277 (2011) 111
41. Ping Xie and Jon R. Sayers
“A Model for Transition of 5’-Nuclease Domain of DNA Polymerase I from Inert to Active Modes”
PLSO 6 (2011) 16213
42. Ping Xie
“A nucleotide binding rectification Brownian ratchet model for translocation of Y-family DNA polymerases”
TBMM 8 (2011) 22
43. Hui Li, Zhao-Wen Duan, Shuo-Xing Dou and Peng-Ye Wang
“The study of EGFR transport in single cell using an automatic method of trajectory identification”
APS 61 (2012) 068701
44. Wei Chen, Jun Huang, Hui Li, Guo-Hua Lv, Xing-Quan Wang, Guo-Ping Zhang, Peng-Ye Wang and Si-Ze Yang
“Inactivation of A549 cancer cells by ahelium-oxygen plasma needle”
APS 61 (2012) 185203
45. Zhi-Qiang Zhang, Cong-Xin Li, Ping Xie and Peng-Ye Wang
“A big cluster model of the PER-TIM interval timer in drosophila cytoplasm for the circadian clock”
APS 61 (2012) 198701
46. Xiu-Yan Ding, Ya-Nan Xu, Wei Li, Peng-Ye Wang, Xu-Guang Xi and Shuo-Xing Dou
“Kinetic study of the DNA annealing properties of RECQ5β helicase”
CSB 57 (2012) 1280
47. Zhi-Qiang Zhang, Yu-Ru Liu, Ping Xie, Wei Li, Shuo-Xing Dou and Peng-Ye Wang
“Studying the interaction between gyrase and DNA using magnetic tweezers”
CSB 57 (2012) 3560
48. Ping Xie
“Modeling translocation dynamics of strand displacement DNA synthesis by DNA polymerase I”
JMM 18 (2012) 1951
49. Ya-Nan Xu, Nicolas Bazeille, Xiu-Yan Ding, Xi-Ming Lu, Peng-Ye Wang, Elisabeth Bugnard, Virginie Grondin, Shuo-Xing Dou and Xu Guang Xi
“Multimeric BLM is dissociated upon ATP hydrolysis and functions as monomers in resolving DNA structures”
NAR 40 (2012) 9802
50. Zhao-Wen Duan, Ping Xie, Wei Li and Peng-Ye Wang
“Are Coiled-Coils of Dimeric Kinesins Unwound during Their Walking on Microtubule”
PO 7 (2012) e36071
51. Hui Li, Zhao-Wen Duan, Ping Xie, Yu-Ru Liu, Wei-Chi Wang, Shuo-Xing Dou and Peng-Ye Wang
“Effects of Paclitaxel on EGFR Endocytic Trafficking Revealed Using Quantum Dot Tracking in Single Cells”
PO 7 (2012) e45465
52. Wei Li, Zhi-Qiang Sun, Ping Xie, Shuo-Xing Dou, Wei-Chi Wang and Peng-Ye Wang
“Elastic response and length change of single DNA molecules induced by a combination of cisplatin and transplatin”
PRE 85 (2012) 021918
53. Wei Li, Peng-Ye Wang, Jie Yan and Ming Li
“Impact of DNA Twist Accumulation on Progressive Helical Wrapping of Torsionally Constrained DNA”
PRL 109 (2012) 218102
54. Ping Xie
“A dynamic model for processive transcription elongation and backtracking long pauses by multisubunit RNA polymerases”
PSFB 80 (2012) 2020
55. Yu-Ru Liu, Chao Ji, Hong-Yan Zhang, Shuo-Xing Dou, Ping Xie, Wei-Chi Wang and Peng-Ye Wang
“Transplatin enhances effect of cisplatin on both single DNA molecules and live tumor cells”
ABB 536 (2013) 12
56. Ping Xie
“Translocation dynamics of tRNA–mRNA in the ribosome”
BC 180 (2013) 22
57. Ping Xie
“Model of ribosome translation and mRNA unwinding”
EBJ 42 (2013) 347
58. Ping Chen, Jicheng Zhao, Yan Wang, Min Wang, Haizhen Long, Dan Liang, Li Huang, Zengqi Wen, Wei Li, Xia Li, Hongli Feng, Haiyong Zhao, Ping Zhu, Ming Li, Qian-fei Wang and Guohong Li
“H3.3 actively marks enhancers and primes gene transcription via opening higher-ordered chromatin”
GD 27 (2013) 2109
59. Wei Li, Xi-Miao Hou, Peng-Ye Wang, Xu-Guang Xi and Ming Li
“Direct Measurement of Sequential Folding Pathway and Energy Landscape of Human Telomeric G‑quadruplex Structures”
JACS 135 (2013) 6423
60. Ping Xie
“Dynamics of DNA polymerase I (Klenow fragment) under external force”
JMM 19 (2013) 1379
61. Ping Xie
“Dynamics of tRNA occupancy and dissociation during translation by the ribosome”
JTB 316 (2013) 49
62. Ping Xie
“A dynamical model of programmed ̶ 1 ribosomal frame shifting”
JTB 336 (2013) 119
63. Ping Xie
“Dynamics of Forward and Backward Translocation of mRNA in the Ribosome”
PO 8 (2013) e70789
64. Hong-Yan Zhang, Yu-Ru Liu, Chao Ji, Wei Li, Shuo-Xing Dou, Ping Xie, Wei-Chi Wang, Lingyun Zhang and Peng-Ye Wang
“Oxaliplatin and Its Enantiomer Induce Different Condensation Dynamics of Single DNA Molecules”
PO 8 (2013) e71556
65. Chao Ji, Lingyun Zhang and Peng-Ye Wang
“Quantitative analysis of the flexibility effect of cisplatin on circular DNA”
PRE 88 (2013) 042703
66. Hong-Yan Zhang, Chao Ji, Yu-Ru Liu, Wei Li, Hui Li, Shuo-Xing Dou, Wei-Chi Wang, Lingyun Zhang, Ping Xie and Peng-Ye Wang
“Effects of pH on Oxaliplatin-Induced Condensation of Single DNA Molecules”
CPL 31 (2014) 028701
67. Chao Ji, Ling-Yun Zhang, Shuo-Xing Dou and Peng-Ye Wang
“Local conformation transitions of linear DNA induced by cisplatin”
CSB 59 (2014) 3085
68. Hong-Yan Zhang, Yu-Ru Liu, Wei Li, Hui Li, Shuo-Xing Dou, Ping Xie, Wei-Chi Wang and Peng-Ye Wang
“Condensations of single DNA molecules induced by heptaplatin and its chiral isomer”
AA 4 (2014) 087128
69. Hai-Peng Ju, Hong-Yan Zhang, Wei Li and Peng-Ye Wang
“Effects of oxaliplatin on DNA condensation”
SC 57 (2014) 2114
70. Ping Xie
“Origin of multiple intersubunit rotations before EF-G-catalyzed ribosomal translocation through the mRNA with a downstream secondary structure”
BB 7 (2014) 12
71. Ping Xie
“An explanation of biphasic characters of mRNA translocationin the ribosome”
BS 118 (2014) 1
72. Ping Xie
“Biphasic character of ribosomal translocation and non-Michaelis-Menten kinetics of translation”
PRE 90 (2014) 062703
73. Ping Xie
“Dynamics of +1 ribosomal frameshifting”
MB 249 (2014) 44
74. Ping Xie
“Dynamics of tRNA translocation, mRNA translocation and tRNA dissociation during ribosome translation through mRNA secondary structures”
EBJ 43 (2014) 229
75. Ping Xie
“Model of EF4-induced ribosomal state transitions and mRNA translocation”
PB 11 (2014) 046007
76. Ping Xie
“On the mechanical force generated by EF-G-catalyzed ribosome translocation”
JMB 3 (2014) 58
77. Yu-Ying Liu, Peng-Ye Wang, Shuo-Xing Dou and Hong-Feng Lv
“Interaction study between DNA and histone proteins on single-molecule level using atomic force microscopy”
CJCP 27 (2014) 115
78. Hui Li, Shuo-Xing Dou, Yu-Ru Liu, Wei Li, Ping Xie, Wei-Chi Wang, and Peng-Ye Wang
“Mapping Intracellular Diffusion Distribution Using Single Quantum Dot Tracking: Compartmentalized Diffusion Defined by Endoplasmic Reticulum”
JACS 137 (2015) 436
79. Wei Li, Wei Juan Wong, Ci Ji Lim, Hai-Peng Ju, Ming Li, Jie Yan and Peng-Ye Wang
“Complex kinetics of DNA condensation revealed through DNA twist tracing”
PRE 92 (2015) 022707
80. Li Wei, Wong Wei-Juan, Lim Ci-Jib, Ju Hai-Peng, Li Ming, Yan Jie and Wang Peng-Ye
“Catch-bond behavior of DNA condensate under tension”
CPB 24 (2015) 128704
81. Chao Ji, Ling-Yun Zhang and Peng-Ye Wang
“Configuration Transitions of Free Circular DNA System Induced by Nicks”
JN 2015 (2015) 546851
82. Zhi Zhou, Ying Hu, Xinyan Shan, Wei Li, Xuedong Bai, Pengye Wang and Xinghua Lu
“Revealing Three Stages of DNA-Cisplatin Reaction by a Solid-State Nanopore”
SR 5 (2015) 11868
83. Yu-Ru Liu, Ping Xie, Peng-Ye Wang, Ming Li, Hui Li, Wei Li and Shuo-Xing Dou
“A model for chromosome organization during the cell cycle in live E. coli”
SR 5 (2015) 17133
84. 李丛鑫，王鹏业，王渭池
“蓝绿菌生物钟调控动力学和机制研究进展”
CBLS 27 (2015) 1320
85. Li Ying, Liu Ren-Wei, Ma Li, Fan Su-Na, Li Hui, Hu Shu-Xin and Li Ming
“Redox-mediate dreversible modulation of the photoluminescence of single quantum dots”
CPB 24 (2015) 078202
86. Ping Xie
“A unified model of nucleic acid unwinding by the ribosome and the hexameric and monomeric DNA helicases”
JTB 380 (2015) 359
87. Ping Xie
“Model of ribosomal translocation coupled with intra-and inter-subunit rotations”
BBR 2 (2015) 87
88. Ping Xie
“Ribosome utilizes the minimum free energy changes to achieve the highest decoding rate and fidelity”
PRE 92 (2015) 022716
89. Xiao-Lei Duan, Na-Nv Liu, Yan-Tao Yang, Hai-Hong Li, Ming Li, Shuo-Xing Dou and Xu-Guang Xi
“G-quadruplexes Significantly Stimulate Pif1 Helicase catalyzed Duplex DNA Unwinding”
JBC 290 (2015) 7722
90. Xi-Miao Hou, Wen-Qiang Wu, Xiao-Lei Duan, Na-Nv Liu, Hai-Hong Li, Jing Fu, Shuo-Xing Dou, Ming Li and Xu-Guang Xi
“Molecular mechanism of G-quadruplex unwinding helicase: sequential and repetitive unfolding of G-quadruplex by Pif1 helicase”
BJ 466 (2015) 189
91. Shuang Wang, Wei Qin, Jing-Hua Li, Ying Lu, Ke-Yu Lu, Da-Guan Nong, Shuo-Xing Dou, Chun-Hua Xu, Xu-Guang Xi and Ming Li
“Unwinding forward and sliding back: an intermittent unwinding mode of the BLM helicase”
NAR 43 (2015) 3736
92. Wei Li, Ping Chen, Juan Yu, ..., Zhiguo Zhang, Ming Li and Guohong Li
“FACT Remodels the Tetranucleosomal Unit of Chromatin Fibers for Gene Transcription”
MC 64 (2016) 120
93. Yi-Ben Fu, Zhan-Feng Wang, Peng-Ye Wang and Ping Xie
“Optimal numbers of residues in linkers of DNA polymerase I, T7 primase and DNA polymerase IV”
SR 6 (2016) 29125
94. Hai-Peng Ju, Yi-Zhou Wang, Jing You, Xi-Miao Hou, Xu-Guang Xi, Shuo-Xing Dou, Wei Li and Peng-Ye Wang
“Folding Kinetics of Single Human Telomeric G‑Quadruplex Affected by Cisplatin”
AO 1 (2016) 244
95. Hui Li, Yong Huang, Peng-Ye Wang, Fangfu Ye, Ji-Long Liu
“Data on dynamic study of cytoophidia in Saccharomy cescerevisiae”
DB 8 (2016) 40
96. Wei-Fei Chen, Yang-Xue Dai, Xiao-Lei Duan, Na-Nv Liu, Wei Shi, Na Li, Ming Li, Shou-Xing Dou, Yu-Hui Dong, Stephane Rety and Xu-Guang Xi
“Crystal structures of the BsPif1 helicase reveal that a major movement of the 2B SH3 domain is required for DNA unwinding”
NAR 44 (2016) 2949
97. Jing-Hua Li, Wen-Xia Lin, Bo Zhang, Da-Guan Nong, Hai-Peng Ju, Jian-Bing Ma, Chun-Hua Xu, Fang-Fu Ye, Xu Guang Xi, Ming Li, Ying Lu and Shuo-Xing Dou
“Pif1 is a force-regulated helicase”
NAR 44 (2016) 4330
98. Qing-Ji Shen, Hakimi Kassim, Yong Huang, Hui Li, Jing Zhang, Guang Li, Peng-Ye Wang, Jun Yan, Fangfu Ye and Ji-Long Liu
“Filamentation of Metabolic Enzymes in Saccharomyces cerevisiae”
JGG 43 (2016) 393
99. Ping Xie
“Dynamics of monomeric and hexameric helicases”
BC 211 (2016) 49
100. Ping Xie
“Model of the pathway of –1 frame shifting: Kinetics”
BBR 5 (2016) 453
101. Ping Xie
“Model of the pathway of –1 frame shifting: Long pausing”
BBR 5 (2016) 408
102. Ping Xie
“Modeling Ribosomal Translocation Facilitated by Peptidyl Transferase Antibiotics”
CMB 9 (2016) 289
103. Ping Xie
“On the pathway of ribosomal translocation”
IJBM 92 (2016) 401
104. Ping Xie
“Processivity of nucleic acid unwinding and translocation by helicases”
Proteins 84 (2016) 1590
105. Si-Kao Guo, Peng-Ye Wang and Ping Xie
“A model of processive movement of dimeric kinesin”
JTB 414 (2017) 62
106. Zhan-Feng Wang, Zhi-Qiang Zhang, Yi-Ben Fu, Peng-Ye Wang and Ping Xie
“Brownian ratchet mechanism of translocation in T7 RNA polymerase facilitated by a post-translocation energy bias arising from the conformational change of the enzyme”
CPB 26 (2017) 030201
107. Zhan-Feng Wang, Yi-Ben Fu, Peng-Ye Wang, and Ping Xie
“Dynamics of bridge helix bending in RNA polymerase II”
Proteins 85 (2017) 614
108. Jing You, Ya-Nan Xu, Hui Li, Xi-Ming Lu, Wei Li, Peng-Ye Wang, Shuo-Xing Dou and Xu-Guang Xi
“Helicase activity and substrate specificity of RecQ5β”
CPB 26 (2017) 068701
109. 吕袭明 李辉 尤菁 李伟 王鹏业 李明 奚绪光 窦硕星
“单分子荧光共振能量转移数据处理的优化算法”
APS 66 (2017) 118701
110. Zhan-Feng Wang, Yu-Ru Liu, Peng-Ye Wang and Ping Xie
“An intermediate state of T7 RNA polymerase provides another pathway of nucleotide selection”
CPB 26 (2017) 100203
111. Xi-Miao Hou, Yi-Ben Fu, Wen-Qiang Wu, Lei Wang, Fang-Yuan Teng, Ping Xie, Peng-Ye Wang and Xu-Guang Xi
“Involvement of G-triplex and G-hairpin in the multi-pathway folding of human telomeric G-quadruplex”
NAR 45 (2017) 11401
112. Si-Kao Guo, Peng-Ye Wang and Ping Xie
“Dynamics of dimeric kinesins: Limping, effect of longitudinal force, effects of neck linker extension and mutation, and comparison between kinesin-1 and kinesin-2”
IJBM 105 (2017) 1126
113. Jing You, Hui Li, Xi-Ming Lu, Wei Li, Peng-Ye Wang, Shuo-Xing Dou and Xu-Guang Xi
“Effects of monovalent cations on folding kinetics of G-quadruplexes”
BR 37 (2017) 20170771
114. Yi-Ben Fu, Yu-Ru Liu, Peng-Ye Wang and Ping Xie
“A Revised Worm-Like Chain Model for Elasticity of Polypeptide Chains”
JPS 00 (2017) 000
115. Ping Xie
“Dynamics of DNA unwinding by helicases with frequent backward steps”
MB 294 (2017) 33
116. Wenxia Lin, Jianbing Ma, Daguan Nong, Chunhua Xu, Bo Zhang, Jinghua Li, Qi Jia, Shuoxing Dou, Fangfu Ye, Xuguang Xi, Ying Lu and Ming Li
“Helicase Stepping Investigated with One-Nucleotide Resolution Fluorescence Resonance Energy Transfer”
PRL 119 (2017) 138102
117. Wen-Qiang Wu, Xi-Miao Hou, Bo Zhang, Philippe Fossé, Brigitte René, Olivier Mauffret, Ming Li, Shuo-Xing Dou and Xu-Guang Xi
“Single-molecule studies reveal reciprocating of WRN helicase core along ssDNA during DNA unwinding”
SR 7 (2017) 43954
118. Yi-Ben Fu, Yu-Ru Liu, Peng-Ye Wang and Ping Xie
“A Revised Worm-Like Chain Model for Elasticity of Polypeptide Chains”
JPS 56 (2018) 297
119. Hui Li, Fangfu Ye, Jing-Yi Ren, Peng-Ye Wang, Li-Lin Du and Ji-Long Liu
“Active transport of cytoophidia in Schizosaccharomyces pombe”
FASEB J 32 (2018) 1
120. Yi-Zhou Wang, Xi-Miao Hou, Hai-Peng Ju, Xue Xiao, Xu-Guang Xi, Shuo-Xing Dou, Peng-Ye Wang, and Wei Li
“Interaction between human telomeric G-quadruplexes characterized by single molecule magnetic tweezers”
CPB 27 (2018) 068701
121. Ping Chen, Liping Dong, Mingli Hu, Yi-Zhou Wang, Xue Xiao, Zhongliang Zhao, Jie Yan, Peng-Ye Wang, Danny Reinberg, Ming Li, Wei Li and Guohong Li
“Functions of FACT in Breaking the Nucleosome and Maintaining Its Integrity at the Single-Nucleosome Level”
MC 71 (2018) 284
122. Si-Kao Guo, Xiao-Xuan Shi, Peng-Ye Wang and Ping Xie
“Processivity of dimeric kinesin-1 molecular motors”
FEBSOB 8 (2018) 1332
“On chemomechanical coupling of the F1-ATPase molecular motor”
BBA 1787 (2009) 955
2. Ping Xie
“Dynamics of backtracking long pauses of RNA polymerase”
BBA 1789 (2009) 212
3. Bing-Yi Pan, Lingyun Zhang, Shuo-Xing Dou and Peng-Ye Wang
“Forces-induced pinpoint denaturation of short DNA”
BBRC 388 (2009) 137
4. Ping Xie
“A thermal ratchet model of tRNA–mRNA translocation by the ribosome”
BS 96 (2009) 19
5. Ping Xie
“A possible mechanism of processive nucleotide and repeat additions by the telomerase”
BS 97 (2009) 168
6. Jun Qian, Ping Xie, Xiao-Guang Xue and Peng-Ye Wang
“Modelling of a DNA packaging motor”
CPB 18 (2009) 4852
7. Ping Xie
“Molecular motors that digest their track to rectify Brownian motion: processive movement of exonuclease enzymes”
JPCM 21 (2009) 375108
8. Xing-Hua Zhang, Xi-Miao Hou, Chao Ji, Ming Li, Shuo-Xing Dou and Peng-Ye Wang
“Spermidine-induced two-dimensional DNA condensations on mica surfaces: A different pathway from condensations in solution”
CSB 54 (2009) 2425
9. Ping Xie
“A possible mechanism for the dynamics of transition between polymerase and exonuclease sites in a high-fidelity DNA polymerase”
JTB 259 (2009) 434
10. Lingyun Zhang and Peng-Ye Wang
“Effect of electron correlation and solvent on the conformational transition of DNA”
MPLB 23 (2009) 1861
11. Xi-Miao Hou, Xing-Hua Zhang, Kong-Ji Wei, Chao Ji, Shuo-Xing Dou, Wei-Chi Wang, Ming Li and Peng-Ye Wang
“Cisplatin induces loop structures and condensation of single DNA molecules”
NAR 37 (2009) 1400
12. Yi Wang, Yongjian Huang, Jiawei Wang, Chao Cheng, Weijiao Huang, Peilong Lu, Ya-Nan Xu, Peng-Ye Wang, Nieng Yan and Yigong Shi
“Structure of the formate transporter FocA reveals a pentameric aquaporin-like channel”
Nature 462 (2009) 467
13. Cong-Xin Li, Xiao-Fang Chen, Peng-Ye Wang and Wei-Chi Wang
“Circadian KaiC Phosphorylation: A Multi-Layer Network”
PCB 5 (2009) 1000568
14. Ping Xie
“Processive hand-over-hand motion of homodimeric nanomotors induced by interaction between two monomeric components and thermal noise”
PRE 79 (2009) 011920
15. Xi-Miao Hou, Wei Li, Shuo-Xing Dou, Ling-Yun Zhang, Ping Xie, Wei-Chi Wang and Peng-Ye Wang
“Formation of DNA toroids inside confined droplets adsorbed on mica surfaces”
PRE 79 (2009) 051912
16. Lingyun Zhang, Peng-Ye Wang and An-Chang Shi
“Spherical/gyroid phase diagram of the diblock copolymer in the median selective solvent”
SCSG 52 (2009) 518
17. Ping Xie
“A polymerase-site-jumping model for strand transfer during DNA synthesis by reverse transcriptase”
VR 144 (2009) 65
18. Ping Xie
“A model for processive movement of single-headed myosin-IX”
BC 151 (2010) 71
19. Ping Xie
“A modified model for translocation events of processive nucleotide and repeat additions by the recombinant telomerase”
BC 153 (2010) 83
20. Ye Yang, Shuo-Xing Dou, Ya-Nan Xu, Nicolas Bazeille, Peng-Ye Wang, Pascal Rigolet, Hou-Qiang Xu and Xu Guang Xi
“Kinetic Mechanism of DNA Unwinding by the BLM Helicase Core and Molecular Basis for Its Low Processivity”
Biochemistry 49 (2010) 656
21. Zhao-Wen Duan, Wei Li, Ping Xie, Shuo-Xing Dou and Peng-Ye Wang
“Brownian dynamics simulation of the cross-talking effect among modified histones on conformations of nucleosomes”
CPB 19 (2010) 048701
22. Bing-Yi Pan, Ling-Yun Zhang, Shuo-Xing Dou and Peng-Ye Wang
“Effect of Laser Field and Mechanical Force on Deoxyribonucleic Acid Melting”
CPL 27 (2010) 078701
23. Xiao-Fang Chen, Cong-Xin Li, Peng-Ye Wang and Wei-Chi Wang
“Cytoplasmic Ca2+ Dynamics under the Interplay between the Different IP3R Gating Models and the Plasma Membrane Ca2+ Influx”
CPL 27 (2010) 010504
24. Cong-Xin Li, Xiao-Fang Chen, Peng-Ye Wang and Wei-Chi Wang
“Effects of CRAC Channel on Spatiotemporal Ca2+ Patterns in T Cells”
CPL 27 (2010) 028701
25. Zhi-Qiang Sun, Ping Xie, Wei Li and Peng-Ye Wang
“Spiking Regularity and Coherence in Complex Hodgkin–Huxley Neuron Networks”
CPL 27 (2010) 088702
26. Ping Xie
“Dynamics of strand passage catalyzed by topoisomerase II”
EBJ 39 (2010) 1251
27. Ping Xie
“Mechanism of Processive Movement of Monomeric and Dimeric Kinesin Molecules”
IJBS 6 (2010) 665
28. Bing-Yi Pan, Shuo-Xing Dou, Ye Yang, Ya-Nan Xu, Elisabeth Bugnard, Xiu-Yan Ding, Lingyun Zhang, Peng-Ye Wang, Ming Li and Xu Guang Xi
“Mutual Inhibition of RecQ Molecules in DNA Unwinding”
JBC 285 (2010) 15884
29. Shuo-Xing Dou and Xu Guang Xi
“Fluorometric assays for characterizing DNA helicases”
Methods 51 (2010) 295
30. 侯锡苗, 张兴华, 魏孔吉, 季超, 窦硕星, 王渭池, 李明, 王鹏业
“用单分子技术研究抗癌药物顺铂对DNA结构的影响”
物理39 (2010) 108
31. 潘秉毅, 张凌云, 窦硕星, 王鹏业
“打开DNA双链的物理新方法——激光微流法”
物理39 (2010) 423
32. Jun Huang, Hui Li, Wei Chen, Guo-Hua Lv, Xing-Quan Wang, Guo-Ping Zhang, Kostya Ostrikov, Peng-Ye Wang and Si-Ze Yang
“Dielectric barrier discharge plasma in Ar/O2 promoting apoptosis behavior in A549 cancer cells”
APL 99 (2011) 253701
33. Chao Ji, Lingyun Zhang, Xi-Miao Hou, Shuo-Xing Dou and Peng-Ye Wang
“Effect of Cisplatin on the Flexibility of Linear DNA”
CPL 28 (2011) 068702
34. Chao Ji, Lingyun Zhang, Shuo-Xing Dou and Peng-Ye Wang
“A new method to deal with biomacromolecular image observed by atomic force microscopy”
APS 60 (2011) 098703
35. Yu-Ying Liu, Peng-Ye Wang, Shuo-Xing Dou, Wei-Wei Zhang, Xue-Jin Wang and Hong-Yi Sang
“Monitoring the binding of metal cations and histones to DNA in real time using fluorescence assays”
CSB 56 (2011) 1080
36. Yu-Ying Liu, Peng-Ye Wang, Shuo-Xing Dou, Wei-Wei Zhang, Xue-Jin Wang and Hong-Yi Sang
“Study of the interaction of DNA and histones by spin-stretching and droplet evaporation”
CSB 56 (2011) 1234
37. Ping Xie
“A model for dynamics of primer extension by eukaryotic DNA primase”
EBJ 40 (2011) 1157
38. Lingyun Zhang and Peng-Ye Wang
“Selectivity and temperature dependence of phase and phase transition in diblock copolymer solution”
EPJE 34 (2011) 43
39. Jun Huang, Wei Chen, Hui Li, Xing-Quan Wang, Guo-Hua Lv, M. Latif Khosa, Ming Guo, Ke-Cheng Feng, Peng-Ye Wang and Si-Ze Yang
“Deactivation of A549 cancer cells in vitro by a dielectric barrier discharge plasma needle”
JAP 109 (2011) 053305
40. Ping Xie
“A model for the dynamics of mammalian family X DNA polymerases”
JTB 277 (2011) 111
41. Ping Xie and Jon R. Sayers
“A Model for Transition of 5’-Nuclease Domain of DNA Polymerase I from Inert to Active Modes”
PLSO 6 (2011) 16213
42. Ping Xie
“A nucleotide binding rectification Brownian ratchet model for translocation of Y-family DNA polymerases”
TBMM 8 (2011) 22
43. Hui Li, Zhao-Wen Duan, Shuo-Xing Dou and Peng-Ye Wang
“The study of EGFR transport in single cell using an automatic method of trajectory identification”
APS 61 (2012) 068701
44. Wei Chen, Jun Huang, Hui Li, Guo-Hua Lv, Xing-Quan Wang, Guo-Ping Zhang, Peng-Ye Wang and Si-Ze Yang
“Inactivation of A549 cancer cells by ahelium-oxygen plasma needle”
APS 61 (2012) 185203
45. Zhi-Qiang Zhang, Cong-Xin Li, Ping Xie and Peng-Ye Wang
“A big cluster model of the PER-TIM interval timer in drosophila cytoplasm for the circadian clock”
APS 61 (2012) 198701
46. Xiu-Yan Ding, Ya-Nan Xu, Wei Li, Peng-Ye Wang, Xu-Guang Xi and Shuo-Xing Dou
“Kinetic study of the DNA annealing properties of RECQ5β helicase”
CSB 57 (2012) 1280
47. Zhi-Qiang Zhang, Yu-Ru Liu, Ping Xie, Wei Li, Shuo-Xing Dou and Peng-Ye Wang
“Studying the interaction between gyrase and DNA using magnetic tweezers”
CSB 57 (2012) 3560
48. Ping Xie
“Modeling translocation dynamics of strand displacement DNA synthesis by DNA polymerase I”
JMM 18 (2012) 1951
49. Ya-Nan Xu, Nicolas Bazeille, Xiu-Yan Ding, Xi-Ming Lu, Peng-Ye Wang, Elisabeth Bugnard, Virginie Grondin, Shuo-Xing Dou and Xu Guang Xi
“Multimeric BLM is dissociated upon ATP hydrolysis and functions as monomers in resolving DNA structures”
NAR 40 (2012) 9802
50. Zhao-Wen Duan, Ping Xie, Wei Li and Peng-Ye Wang
“Are Coiled-Coils of Dimeric Kinesins Unwound during Their Walking on Microtubule”
PO 7 (2012) e36071
51. Hui Li, Zhao-Wen Duan, Ping Xie, Yu-Ru Liu, Wei-Chi Wang, Shuo-Xing Dou and Peng-Ye Wang
“Effects of Paclitaxel on EGFR Endocytic Trafficking Revealed Using Quantum Dot Tracking in Single Cells”
PO 7 (2012) e45465
52. Wei Li, Zhi-Qiang Sun, Ping Xie, Shuo-Xing Dou, Wei-Chi Wang and Peng-Ye Wang
“Elastic response and length change of single DNA molecules induced by a combination of cisplatin and transplatin”
PRE 85 (2012) 021918
53. Wei Li, Peng-Ye Wang, Jie Yan and Ming Li
“Impact of DNA Twist Accumulation on Progressive Helical Wrapping of Torsionally Constrained DNA”
PRL 109 (2012) 218102
54. Ping Xie
“A dynamic model for processive transcription elongation and backtracking long pauses by multisubunit RNA polymerases”
PSFB 80 (2012) 2020
55. Yu-Ru Liu, Chao Ji, Hong-Yan Zhang, Shuo-Xing Dou, Ping Xie, Wei-Chi Wang and Peng-Ye Wang
“Transplatin enhances effect of cisplatin on both single DNA molecules and live tumor cells”
ABB 536 (2013) 12
56. Ping Xie
“Translocation dynamics of tRNA–mRNA in the ribosome”
BC 180 (2013) 22
57. Ping Xie
“Model of ribosome translation and mRNA unwinding”
EBJ 42 (2013) 347
58. Ping Chen, Jicheng Zhao, Yan Wang, Min Wang, Haizhen Long, Dan Liang, Li Huang, Zengqi Wen, Wei Li, Xia Li, Hongli Feng, Haiyong Zhao, Ping Zhu, Ming Li, Qian-fei Wang and Guohong Li
“H3.3 actively marks enhancers and primes gene transcription via opening higher-ordered chromatin”
GD 27 (2013) 2109
59. Wei Li, Xi-Miao Hou, Peng-Ye Wang, Xu-Guang Xi and Ming Li
“Direct Measurement of Sequential Folding Pathway and Energy Landscape of Human Telomeric G‑quadruplex Structures”
JACS 135 (2013) 6423
60. Ping Xie
“Dynamics of DNA polymerase I (Klenow fragment) under external force”
JMM 19 (2013) 1379
61. Ping Xie
“Dynamics of tRNA occupancy and dissociation during translation by the ribosome”
JTB 316 (2013) 49
62. Ping Xie
“A dynamical model of programmed ̶ 1 ribosomal frame shifting”
JTB 336 (2013) 119
63. Ping Xie
“Dynamics of Forward and Backward Translocation of mRNA in the Ribosome”
PO 8 (2013) e70789
64. Hong-Yan Zhang, Yu-Ru Liu, Chao Ji, Wei Li, Shuo-Xing Dou, Ping Xie, Wei-Chi Wang, Lingyun Zhang and Peng-Ye Wang
“Oxaliplatin and Its Enantiomer Induce Different Condensation Dynamics of Single DNA Molecules”
PO 8 (2013) e71556
65. Chao Ji, Lingyun Zhang and Peng-Ye Wang
“Quantitative analysis of the flexibility effect of cisplatin on circular DNA”
PRE 88 (2013) 042703
66. Hong-Yan Zhang, Chao Ji, Yu-Ru Liu, Wei Li, Hui Li, Shuo-Xing Dou, Wei-Chi Wang, Lingyun Zhang, Ping Xie and Peng-Ye Wang
“Effects of pH on Oxaliplatin-Induced Condensation of Single DNA Molecules”
CPL 31 (2014) 028701
67. Chao Ji, Ling-Yun Zhang, Shuo-Xing Dou and Peng-Ye Wang
“Local conformation transitions of linear DNA induced by cisplatin”
CSB 59 (2014) 3085
68. Hong-Yan Zhang, Yu-Ru Liu, Wei Li, Hui Li, Shuo-Xing Dou, Ping Xie, Wei-Chi Wang and Peng-Ye Wang
“Condensations of single DNA molecules induced by heptaplatin and its chiral isomer”
AA 4 (2014) 087128
69. Hai-Peng Ju, Hong-Yan Zhang, Wei Li and Peng-Ye Wang
“Effects of oxaliplatin on DNA condensation”
SC 57 (2014) 2114
70. Ping Xie
“Origin of multiple intersubunit rotations before EF-G-catalyzed ribosomal translocation through the mRNA with a downstream secondary structure”
BB 7 (2014) 12
71. Ping Xie
“An explanation of biphasic characters of mRNA translocationin the ribosome”
BS 118 (2014) 1
72. Ping Xie
“Biphasic character of ribosomal translocation and non-Michaelis-Menten kinetics of translation”
PRE 90 (2014) 062703
73. Ping Xie
“Dynamics of +1 ribosomal frameshifting”
MB 249 (2014) 44
74. Ping Xie
“Dynamics of tRNA translocation, mRNA translocation and tRNA dissociation during ribosome translation through mRNA secondary structures”
EBJ 43 (2014) 229
75. Ping Xie
“Model of EF4-induced ribosomal state transitions and mRNA translocation”
PB 11 (2014) 046007
76. Ping Xie
“On the mechanical force generated by EF-G-catalyzed ribosome translocation”
JMB 3 (2014) 58
77. Yu-Ying Liu, Peng-Ye Wang, Shuo-Xing Dou and Hong-Feng Lv
“Interaction study between DNA and histone proteins on single-molecule level using atomic force microscopy”
CJCP 27 (2014) 115
78. Hui Li, Shuo-Xing Dou, Yu-Ru Liu, Wei Li, Ping Xie, Wei-Chi Wang, and Peng-Ye Wang
“Mapping Intracellular Diffusion Distribution Using Single Quantum Dot Tracking: Compartmentalized Diffusion Defined by Endoplasmic Reticulum”
JACS 137 (2015) 436
79. Wei Li, Wei Juan Wong, Ci Ji Lim, Hai-Peng Ju, Ming Li, Jie Yan and Peng-Ye Wang
“Complex kinetics of DNA condensation revealed through DNA twist tracing”
PRE 92 (2015) 022707
80. Li Wei, Wong Wei-Juan, Lim Ci-Jib, Ju Hai-Peng, Li Ming, Yan Jie and Wang Peng-Ye
“Catch-bond behavior of DNA condensate under tension”
CPB 24 (2015) 128704
81. Chao Ji, Ling-Yun Zhang and Peng-Ye Wang
“Configuration Transitions of Free Circular DNA System Induced by Nicks”
JN 2015 (2015) 546851
82. Zhi Zhou, Ying Hu, Xinyan Shan, Wei Li, Xuedong Bai, Pengye Wang and Xinghua Lu
“Revealing Three Stages of DNA-Cisplatin Reaction by a Solid-State Nanopore”
SR 5 (2015) 11868
83. Yu-Ru Liu, Ping Xie, Peng-Ye Wang, Ming Li, Hui Li, Wei Li and Shuo-Xing Dou
“A model for chromosome organization during the cell cycle in live E. coli”
SR 5 (2015) 17133
84. 李丛鑫，王鹏业，王渭池
“蓝绿菌生物钟调控动力学和机制研究进展”
CBLS 27 (2015) 1320
85. Li Ying, Liu Ren-Wei, Ma Li, Fan Su-Na, Li Hui, Hu Shu-Xin and Li Ming
“Redox-mediate dreversible modulation of the photoluminescence of single quantum dots”
CPB 24 (2015) 078202
86. Ping Xie
“A unified model of nucleic acid unwinding by the ribosome and the hexameric and monomeric DNA helicases”
JTB 380 (2015) 359
87. Ping Xie
“Model of ribosomal translocation coupled with intra-and inter-subunit rotations”
BBR 2 (2015) 87
88. Ping Xie
“Ribosome utilizes the minimum free energy changes to achieve the highest decoding rate and fidelity”
PRE 92 (2015) 022716
89. Xiao-Lei Duan, Na-Nv Liu, Yan-Tao Yang, Hai-Hong Li, Ming Li, Shuo-Xing Dou and Xu-Guang Xi
“G-quadruplexes Significantly Stimulate Pif1 Helicase catalyzed Duplex DNA Unwinding”
JBC 290 (2015) 7722
90. Xi-Miao Hou, Wen-Qiang Wu, Xiao-Lei Duan, Na-Nv Liu, Hai-Hong Li, Jing Fu, Shuo-Xing Dou, Ming Li and Xu-Guang Xi
“Molecular mechanism of G-quadruplex unwinding helicase: sequential and repetitive unfolding of G-quadruplex by Pif1 helicase”
BJ 466 (2015) 189
91. Shuang Wang, Wei Qin, Jing-Hua Li, Ying Lu, Ke-Yu Lu, Da-Guan Nong, Shuo-Xing Dou, Chun-Hua Xu, Xu-Guang Xi and Ming Li
“Unwinding forward and sliding back: an intermittent unwinding mode of the BLM helicase”
NAR 43 (2015) 3736
92. Wei Li, Ping Chen, Juan Yu, ..., Zhiguo Zhang, Ming Li and Guohong Li
“FACT Remodels the Tetranucleosomal Unit of Chromatin Fibers for Gene Transcription”
MC 64 (2016) 120
93. Yi-Ben Fu, Zhan-Feng Wang, Peng-Ye Wang and Ping Xie
“Optimal numbers of residues in linkers of DNA polymerase I, T7 primase and DNA polymerase IV”
SR 6 (2016) 29125
94. Hai-Peng Ju, Yi-Zhou Wang, Jing You, Xi-Miao Hou, Xu-Guang Xi, Shuo-Xing Dou, Wei Li and Peng-Ye Wang
“Folding Kinetics of Single Human Telomeric G‑Quadruplex Affected by Cisplatin”
AO 1 (2016) 244
95. Hui Li, Yong Huang, Peng-Ye Wang, Fangfu Ye, Ji-Long Liu
“Data on dynamic study of cytoophidia in Saccharomy cescerevisiae”
DB 8 (2016) 40
96. Wei-Fei Chen, Yang-Xue Dai, Xiao-Lei Duan, Na-Nv Liu, Wei Shi, Na Li, Ming Li, Shou-Xing Dou, Yu-Hui Dong, Stephane Rety and Xu-Guang Xi
“Crystal structures of the BsPif1 helicase reveal that a major movement of the 2B SH3 domain is required for DNA unwinding”
NAR 44 (2016) 2949
97. Jing-Hua Li, Wen-Xia Lin, Bo Zhang, Da-Guan Nong, Hai-Peng Ju, Jian-Bing Ma, Chun-Hua Xu, Fang-Fu Ye, Xu Guang Xi, Ming Li, Ying Lu and Shuo-Xing Dou
“Pif1 is a force-regulated helicase”
NAR 44 (2016) 4330
98. Qing-Ji Shen, Hakimi Kassim, Yong Huang, Hui Li, Jing Zhang, Guang Li, Peng-Ye Wang, Jun Yan, Fangfu Ye and Ji-Long Liu
“Filamentation of Metabolic Enzymes in Saccharomyces cerevisiae”
JGG 43 (2016) 393
99. Ping Xie
“Dynamics of monomeric and hexameric helicases”
BC 211 (2016) 49
100. Ping Xie
“Model of the pathway of –1 frame shifting: Kinetics”
BBR 5 (2016) 453
101. Ping Xie
“Model of the pathway of –1 frame shifting: Long pausing”
BBR 5 (2016) 408
102. Ping Xie
“Modeling Ribosomal Translocation Facilitated by Peptidyl Transferase Antibiotics”
CMB 9 (2016) 289
103. Ping Xie
“On the pathway of ribosomal translocation”
IJBM 92 (2016) 401
104. Ping Xie
“Processivity of nucleic acid unwinding and translocation by helicases”
Proteins 84 (2016) 1590
105. Si-Kao Guo, Peng-Ye Wang and Ping Xie
“A model of processive movement of dimeric kinesin”
JTB 414 (2017) 62
106. Zhan-Feng Wang, Zhi-Qiang Zhang, Yi-Ben Fu, Peng-Ye Wang and Ping Xie
“Brownian ratchet mechanism of translocation in T7 RNA polymerase facilitated by a post-translocation energy bias arising from the conformational change of the enzyme”
CPB 26 (2017) 030201
107. Zhan-Feng Wang, Yi-Ben Fu, Peng-Ye Wang, and Ping Xie
“Dynamics of bridge helix bending in RNA polymerase II”
Proteins 85 (2017) 614
108. Jing You, Ya-Nan Xu, Hui Li, Xi-Ming Lu, Wei Li, Peng-Ye Wang, Shuo-Xing Dou and Xu-Guang Xi
“Helicase activity and substrate specificity of RecQ5β”
CPB 26 (2017) 068701
109. 吕袭明 李辉 尤菁 李伟 王鹏业 李明 奚绪光 窦硕星
“单分子荧光共振能量转移数据处理的优化算法”
APS 66 (2017) 118701
110. Zhan-Feng Wang, Yu-Ru Liu, Peng-Ye Wang and Ping Xie
“An intermediate state of T7 RNA polymerase provides another pathway of nucleotide selection”
CPB 26 (2017) 100203
111. Xi-Miao Hou, Yi-Ben Fu, Wen-Qiang Wu, Lei Wang, Fang-Yuan Teng, Ping Xie, Peng-Ye Wang and Xu-Guang Xi
“Involvement of G-triplex and G-hairpin in the multi-pathway folding of human telomeric G-quadruplex”
NAR 45 (2017) 11401
112. Si-Kao Guo, Peng-Ye Wang and Ping Xie
“Dynamics of dimeric kinesins: Limping, effect of longitudinal force, effects of neck linker extension and mutation, and comparison between kinesin-1 and kinesin-2”
IJBM 105 (2017) 1126
113. Jing You, Hui Li, Xi-Ming Lu, Wei Li, Peng-Ye Wang, Shuo-Xing Dou and Xu-Guang Xi
“Effects of monovalent cations on folding kinetics of G-quadruplexes”
BR 37 (2017) 20170771
114. Yi-Ben Fu, Yu-Ru Liu, Peng-Ye Wang and Ping Xie
“A Revised Worm-Like Chain Model for Elasticity of Polypeptide Chains”
JPS 00 (2017) 000
115. Ping Xie
“Dynamics of DNA unwinding by helicases with frequent backward steps”
MB 294 (2017) 33
116. Wenxia Lin, Jianbing Ma, Daguan Nong, Chunhua Xu, Bo Zhang, Jinghua Li, Qi Jia, Shuoxing Dou, Fangfu Ye, Xuguang Xi, Ying Lu and Ming Li
“Helicase Stepping Investigated with One-Nucleotide Resolution Fluorescence Resonance Energy Transfer”
PRL 119 (2017) 138102
117. Wen-Qiang Wu, Xi-Miao Hou, Bo Zhang, Philippe Fossé, Brigitte René, Olivier Mauffret, Ming Li, Shuo-Xing Dou and Xu-Guang Xi
“Single-molecule studies reveal reciprocating of WRN helicase core along ssDNA during DNA unwinding”
SR 7 (2017) 43954
118. Yi-Ben Fu, Yu-Ru Liu, Peng-Ye Wang and Ping Xie
“A Revised Worm-Like Chain Model for Elasticity of Polypeptide Chains”
JPS 56 (2018) 297
119. Hui Li, Fangfu Ye, Jing-Yi Ren, Peng-Ye Wang, Li-Lin Du and Ji-Long Liu
“Active transport of cytoophidia in Schizosaccharomyces pombe”
FASEB J 32 (2018) 1
120. Yi-Zhou Wang, Xi-Miao Hou, Hai-Peng Ju, Xue Xiao, Xu-Guang Xi, Shuo-Xing Dou, Peng-Ye Wang, and Wei Li
“Interaction between human telomeric G-quadruplexes characterized by single molecule magnetic tweezers”
CPB 27 (2018) 068701
121. Ping Chen, Liping Dong, Mingli Hu, Yi-Zhou Wang, Xue Xiao, Zhongliang Zhao, Jie Yan, Peng-Ye Wang, Danny Reinberg, Ming Li, Wei Li and Guohong Li
“Functions of FACT in Breaking the Nucleosome and Maintaining Its Integrity at the Single-Nucleosome Level”
MC 71 (2018) 284
122. Si-Kao Guo, Xiao-Xuan Shi, Peng-Ye Wang and Ping Xie
“Processivity of dimeric kinesin-1 molecular motors”
FEBSOB 8 (2018) 1332